Molecular Systems Biology - University of Vienna

Software

FEMTO

Functional Interpretation of Metabolomic Time Series Data in Context of Metabolic Network Information.

Download FEMTO (ZIP file) 

Read Publication: Functional Interpretation of Metabolomic Time Series Data

Getting Started

  1. Download the ZIP-File.
  2. Uncompress the downloaded file into a directory.
  3. Start Matlab, go into the directory of FEMTO
  4. command “FEMTO”

COVAIN

A toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data.

Download COVAIN (ZIP file) 

Read Publication: COVAIN: A toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data.

Getting Started

  1. Download the ZIP-File.
  2. Uncompress the downloaded file into a directory.
  3. Start Matlab, go into the directory of COVAIN
  4. command “COVAIN”
Wolfram Weckwerth

COVAIN program

ProtMAX

A fast and robust software tool for analyzing large shotgun proteomics mass spectrometry data sets.

Download ProtMAX (ZIP file)

Download Test data (Zip file)

Getting Started

  1. Download ProtMAX. See above.
  2. Uncompress the downloaded file into a directory.
  3. Start Installation via ‘setup.exe’