Publications


Showing entries 200 - 220 out of 367

Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data. / Lyon, David; Castillejo, Maria Angeles; Staudinger, Christiana; Weckwerth, Wolfram; Wienkoop, Stefanie; Egelhofer, Volker.

In: PLoS ONE, Vol. 9, No. 4, 2014, p. e94692.

Publication: Contribution to journalArticlepeer-review


Draft Genome Sequence of the Growth-Promoting Endophyte Paenibacillus sp. P22, Isolated from Populus. / Hanak, Anne-Mette; Nagler, Matthias; Weinmaier, Thomas; Sun, Xiaoliang; Fragner, Lena; Schwab, Clarissa; Rattei, Thomas; Ulrich, Kristina; Ewald, Dietrich; Engel, Marion; Schloter, Michael; Bittner, Romana; Schleper, Christa; Weckwerth, Wolfram.

In: Genome Announcements, Vol. 2, No. 2, 2014, p. e00276-14.

Publication: Contribution to journalArticlepeer-review


Ectopic overexpression of the cell wall invertase gene CIN1 leads to dehydration avoidance in tomato. / Albacete, Alfonso; Cantero-Navarro, Elena; Großinsky, Dominik K.; Arias, Cintia L.; Encarnation Balibrea, Maria; Bru, Roque; Fragner, Lena; Ghanem, Michael E.; de la Cruz Gonzalez, Maria; Hernandez, Jose A.; Martinez-Andujar, Cristina; van der Graaff, Eric; Weckwerth, Wolfram; Zellnig, Günther; Perez-Alfocea, Francisco (Corresponding author); Roitsch, Thomas.

In: Journal of Experimental Botany, 2014, p. eru448.

Publication: Contribution to journalArticlepeer-review


From proteomics to systems biology : MAPA, MASS WESTERN, PROMEX, and COVAIN as a user-oriented platform. / Weckwerth, Wolfram; Wienkoop, Stefanie; Hoehenwarter, Wolfgang; Egelhofer, Volker; Sun, Xiaoliang.

In: Methods in Molecular Biology, Vol. 1072, 2014, p. 15-27.

Publication: Contribution to journalArticlepeer-review


Linking metabolomics data to underlying metabolic regulation. / Nägele, Thomas.

In: Frontiers in Molecular Biosciences, Vol. 1, No. 22, 2014.

Publication: Contribution to journalReviewpeer-review


Mass Western for absolute quantification of target proteins and considerations about the instrument of choice. / Lyon, David; Weckwerth, Wolfram; Wienkoop, Stefanie.

Plant Proteomics : Methods in Molecular Biology. Vol. 1072 Humana Press, Inc., 2014. p. 199-208 (Methods in Molecular Biology, Vol. 1072).

Publication: Contribution to bookChapter


Medicago truncatula proteomics for systems biology: Novel rapid shotgun LC-MS approach for relative quantification based on full-scan selective peptide extraction (Selpex). / Castillejo, M Angeles; Staudinger, Christiana; Egelhofer, Volker; Wienkoop, Stefanie.

Plant Proteomics: Methods and Protocols. Vol. 1072 Humana Press, Inc., 2014. p. 303-313 (Methods in Molecular Biology, Vol. 1072).

Publication: Contribution to bookChapterpeer-review


Phosphorylation of Arabidopsis transketolase at Ser-428 provides a potential paradigm for metabolic control of chloroplast carbon metabolism. / Rocha, Agostinho G; Mehlmer, Norbert; Stael, Simon; Mair, Andrea; Parvin, Nargis; Chigri, Fatima; Teige, Markus; Vothknecht, Ute C.

In: Biochemical Journal, Vol. 458, 2014, p. 313-322.

Publication: Contribution to journalArticlepeer-review


Solving the differential biochemical Jacobian from metabolomics covariance data. / Nägele, Thomas; Mair, Andrea; Sun, Xiaoliang; Fragner, Lena; Teige, Markus; Weckwerth, Wolfram.

In: PLoS ONE, Vol. 9, No. 4, 2014, p. e92299.

Publication: Contribution to journalArticlepeer-review


Tandem Metal-Oxide Affinity Chromatography for Enhanced Depth of Phosphoproteome Analysis. / Beckers, Gerold J M; Höhenwarter, Wolfgang; Röhrig, Horst; Conrath, Uwe; Weckwerth, Wolfram.

Methods in Molecular Biology: Plant Proteomics - Methods and Protocols. ed. / Jesus V. Jorrin-Novo; Setsuko Komatsu; Wolfram Weckwerth; Stefanie Wienkoop. Vol. 1072 Humana Press, 2014. p. 621-632.

Publication: Contribution to bookChapterpeer-review


The dynamic behavior of storage organelles in developing cereal seeds and its impact on the production of recombinant proteins. / Arcalis, Elsa; Ibl, Verena; Peters, Jenny; Melnik, Stanislav; Stoger, Eva.

In: Frontiers in Plant Science, Vol. 5, 2014, p. 439.

Publication: Contribution to journalArticlepeer-review


The low energy signaling network. / Tomé, Filipa; Nägele, Thomas; Adamo, Mattia; Garg, Abhroop; Marco-Llorca, Carles; Nukarinen, Ella; Pedrotti, Lorenzo; Peviani, Alessia; Simeunovic, Andrea; Tatkiewicz, Anna; Tomar, Monika; Gamm, Magdalena.

In: Frontiers in Plant Science, Vol. 5, 2014, p. 353.

Publication: Contribution to journalArticlepeer-review


A workflow for mathematical modeling of subcellular metabolic pathways in leaf metabolism of Arabidopsis thaliana. / Nägele, Thomas; Weckwerth, Wolfram.

In: Frontiers in Plant Science, Vol. 4, 24.12.2013, p. 541.

Publication: Contribution to journalArticlepeer-review


Identification of putative new tomato allergens and differential interaction with IgEs of tomato allergic subjects. / Welter, Saskia; Lehmann, K.; Doelle, S.; Schwarz, D.; Weckwerth, W.; Scheler, Christian; Worm, Margitta; Franken, Philipp.

In: Clinical and Experimental Allergy, Vol. 43, No. 12, 12.2013, p. 1419-1427.

Publication: Contribution to journalArticlepeer-review


Cell-specific Analysis of the Tomato Pollen Proteome from Pollen Mother Cell to Mature Pollen Provides Evidence for Developmental Priming. / Chaturvedi, Palak; Ischebeck, Till; Egelhofer, Volker; Lichtscheidl-Schultz, Irene; Weckwerth, Wolfram.

In: Journal of Proteome Research, Vol. 12, No. 11, 01.11.2013, p. 4892-4903.

Publication: Contribution to journalArticlepeer-review


INPPO Actions and Recognition as a Driving Force for Progress in Plant Proteomics : Change of Guard, INPPO Update, and Upcoming Activities. / Agrawal, Ganesh Kumar; Job, Dominique; Kieselbach, Thomas; Barkla, Bronwyn J.; Chen, Sixue; Deswal, Renu; Luethje, Sabine; Amalraj, Ramesh Sundar; Tanou, Georgia; Ndimba, Bongani Kaiser; Cramer, Rainer; Weckwerth, Wolfram; Wienkoop, Stefanie; Dunn, Michael J.; Kim, Sun Tae; Fukao, Yochiro; Yonekura, Masami; Zolla, Lello; Rohila, Jai Singh; Waditee-Sirisattha, Rungaroon; Masi, Antonio; Wang, Tai; Sarkar, Abhijit; Agrawal, Raj; Renaut, Jenny; Rakwal, Randeep.

In: Proteomics, Vol. 13, No. 21, 11.2013, p. 3093-3100.

Publication: Contribution to journalArticlepeer-review


Responses of antioxidant enzymes to cold and high light are not correlated to freezing tolerance in natural accessions of Arabidopsis thaliana. / Distelbarth, Heidrun; Nägele, Thomas; Heyer, Arnd G.

In: Plant Biology, Vol. 15, No. 6, 11.2013, p. 982-990.

Publication: Contribution to journalArticlepeer-review


The plasma membrane proteome of maize roots grown under low and high iron conditions. / Hopff, David; Wienkoop, Stefanie; Lüthje, Sabine.

In: Journal of Proteomics, Vol. 91, 08.10.2013, p. 605-18.

Publication: Contribution to journalArticlepeer-review


Comprehensive cell-specific protein analysis in early and late pollen development from diploid microsporocytes to pollen tube growth. / Ischebeck, Till; Valledor, Luis; Lyon, David; Gingl, Stephanie; Nagler, Matthias; Meijon, Monica; Egelhofer, Volker; Weckwerth, Wolfram.

In: Molecular and Cellular Proteomics, Vol. 13, 27.09.2013, p. 295-310.

Publication: Contribution to journalArticlepeer-review


Showing entries 200 - 220 out of 367