Publications
Editorial for the special issue “Control-theoretic approaches for systems in the life sciences”. / Giordano, Giulia; Bates, Declan; Palumbo, Pasquale; Paré, Philip E.; Rivera, Daniel E.; Waldherr, Steffen.
In: International Journal of Robust and Nonlinear Control, Vol. 33, No. 9, 06.2023, p. 4703-4707.Publication: Contribution to journal › Editorial
A bench-top Dark-Root device built with LEGO® bricks enables a non-invasive plant root development analysis in soil conditions mirroring nature. / Dermendjiev, Georgi-Atanasov; Schnurer, Madeleine; Stewart, Ethan; Nägele, Thomas; Marino, Giada; Leister, Dario; Thür, Alexandra; Plott, Stefan; Jez, Jakub; Ibl, Verena (Corresponding author).
In: Frontiers in Plant Science, 31.05.2023.Publication: Contribution to journal › Article › peer-review
Numerical Gaussian Process Kalman Filtering for Spatiotemporal Systems. / Kuper, Armin; Waldherr, Steffen.
In: IEEE Transactions on Automatic Control, Vol. 68, No. 5, 01.05.2023, p. 3131-3138.Publication: Contribution to journal › Article › peer-review
Perspectives of (/memorandum for) systems thinking on COVID-19 pandemic and pathology. / Tretter, Felix; Peters, Eva M J; Sturmberg, Joachim; Bennett, Jeanette; Voit, Eberhard; Dietrich, Johannes W; Smith, Gary; Weckwerth, Wolfram; Grossman, Zvi; Wolkenhauer, Olaf; Marcum, James A (Corresponding author).
In: Journal of Evaluation in Clinical Practice, Vol. 29, No. 3, 04.2023, p. 415-429.Publication: Contribution to journal › Article › peer-review
Predicting overall mass transfer coefficients of CO2 capture into monoethanolamine in spray columns with hybrid machine learning. / Di Caprio, Ulderico; Wu, Min; Vermeire, Florence; Van Gerven, Tom; Hellinckx, Peter; Waldherr, Steffen; Kayahan, Emine; Leblebici, M. Enis.
In: Journal of CO2 Utilization, Vol. 70, 102452, 04.2023.Publication: Contribution to journal › Article › peer-review
Unexpected complexity of the ammonia monooxygenase in archaea. / Hodgskiss, Logan H; Melcher, Michael; Kerou, Melina; Chen, Weiqiang; Ponce-Toledo, Rafael I; Savvides, Savvas N; Wienkoop, Stefanie; Hartl, Markus; Schleper, Christa (Corresponding author).
In: The ISME Journal, Vol. 17, No. 4, 04.2023, p. 588-599.Publication: Contribution to journal › Article › peer-review
A bench-top dark-root device built with LEGO® bricks enables a non-invasive plant root development analysis in soil conditions mirroring nature. / Dermendjiev, Georgi-Atanasov; Schnurer, Madeleine; Stewart, Ethan; Nägele, Thomas; Marino, Giada; Leister, Dario; Thür, Alexandra; Plott, Stefan; Jez, Jakub; Ibl, Verena (Corresponding author).
2023.Publication: Working paper › Preprint
Isomer analysis by mass spectrometry in clinical science. / Furuhashi, Takeshi; Weckwerth, Wolfram.
In: TrAC - Trends in Analytical Chemistry, Vol. 159, 116907, 02.2023.Publication: Contribution to journal › Review › peer-review
Heat-induced proteomic changes in anthers of contrasting rice genotypes under variable stress regimes. / Kumar, Ritesh; Ghatak, Arindam; Goyal, Isha; Sarkar, Neelam K.; Weckwerth, Wolfram; Grover, Anil; Chaturvedi, Palak.
In: Frontiers in Plant Science, Vol. 13, 1083971, 13.01.2023.Publication: Contribution to journal › Article › peer-review
PANOMICS at the interface of root-soil microbiome and BNI. / Ghatak, Arindam; Chaturvedi, Palak; Waldherr, Steffen; Subbarao, Guntur Venkata; Weckwerth, Wolfram.
In: Trends in Plant Science, Vol. 28, No. 1, 01.01.2023, p. 106-122.Publication: Contribution to journal › Review › peer-review
Proteomics for abiotic stresses in legumes : present status and future directions. / Jan, Nelofer; Rather, Asif Mohi-Ud-Din; John, Riffat; Chaturvedi, Palak; Ghatak, Arindam; Weckwerth, Wolfram; Zargar, Sajad Majeed; Mir, Rakeeb Ahmad; Khan, Mohd Anwar; Mir, Reyazul Rouf (Corresponding author).
In: Critical Reviews in Biotechnology, Vol. 43, No. 2, 2023, p. 171-190.Publication: Contribution to journal › Review › peer-review
Recent advances and challenges in potato improvement using CRISPR/Cas genome editing. / Chincinska, Izabela Anna; Miklaszewska, Magdalena; Sołtys-Kalina, Dorota.
In: Planta, Vol. 257, No. 1, 25, 23.12.2022.Publication: Contribution to journal › Review › peer-review
Organelles and phytohormones : a network of interactions in plant stress responses. / Bittner, Andras; Cieśla, Agata; Gruden, Kristina; Lukan, Tjaša; Mahmud, Sakil; Teige, Markus; Vothknecht, Ute C; Wurzinger, Bernhard.
In: Journal of Experimental Botany, Vol. 73, No. 21, 19.11.2022, p. 7165-7181.Publication: Contribution to journal › Review › peer-review
Plant organellar signalling-back and forth and intertwined with cellular signalling. / Teige, Markus; Jones, Matt; Toledo-Ortiz, Gabriela.
In: Journal of Experimental Botany, Vol. 73, No. 21, 19.11.2022, p. 7103-7104.Publication: Contribution to journal › Article
Interpretable machine learning methods for predictions in systems biology from omics data. / Sidak, David; Schwarzerová, Jana; Weckwerth, Wolfram; Waldherr, Steffen (Corresponding author).
In: Frontiers in Molecular Biosciences, Vol. 9, 926623, 17.10.2022.Publication: Contribution to journal › Review › peer-review
Branched-chain ketoacids derived from cancer cells modulate macrophage polarization and metabolic reprogramming. / Cai, Zhengnan; Li, Wan; Brenner, Martin; Bahiraii, Sheyda; Heiss, Elke H; Weckwerth, Wolfram.
In: Frontiers in Immunology, No. 13, 966158, 13.10.2022.Publication: Contribution to journal › Article › peer-review
Local and systemic metabolic adjustments to drought in maize : Hydraulic redistribution in a split-root system. / Werner, Lena Maria; Hartwig, Roman Paul; Engel, Isabelle; Franzisky, Bastian Leander; Wienkoop, Stefanie; Brenner, Martin; Preiner, Julian; Repper, Dagmar; Hartung, Jens; Zoerb, Christian; Wimmer, Monika Andrea (Corresponding author).
In: Journal of Plant Nutrition and Soil Science, Vol. 185, No. 5, 10.2022, p. 632-642.Publication: Contribution to journal › Article › peer-review
Influence of the environment on ragweed pollen and their sensitizing capacity in a mouse model of allergic lung inflammation. / Liu, Shu-Hua; Kazemi, Sahar; Karrer, Gerhard; Bellaire, Anke; Weckwerth, Wolfram; Damkjaer, Jakob; Hoffmann, Oskar; Epstein, Michelle M.
In: Frontiers in allergy, Vol. 3, 854038, 05.08.2022.Publication: Contribution to journal › Article › peer-review
Sulforaphane diminishes moonlighting of pyruvate kinase M2 and interleukin 1β expression in M1 (LPS) macrophages. / Bahiraii, Sheyda; Brenner, Martin; Yan, Fangfang; Weckwerth, Wolfram; Heiss, Elke H.
In: Frontiers in Immunology, Vol. 13, 935692, 02.08.2022.Publication: Contribution to journal › Article › peer-review
Identification of apple cultivars hypoallergenic for birch pollen-allergic individuals by a multidisciplinary in vitro and in vivo approach. / Strobl, Maria; Vollmann, Ute; Eckl-Dorna, Julia; Radakovics, Astrid; Ibl, Verena; Schnurer, Madeleine; Brenner, Martin; Dermendjiev, Georgi-Atanasov; Weckwerth, Wolfram; Neumüller, Michael; Frommlet, Florian; Demir, Hilal; Bublin, Merima; Müller, Christian; Bohle, Barbara (Corresponding author).
In: Clinical and Experimental Allergy, Vol. 12, No. 8, e12186, 08.2022.Publication: Contribution to journal › Article › peer-review