Publications


Natural variation in the chickpea metabolome under drought stress. / Chaturvedi, Palak (Corresponding author); Pierides, Iro; López-Hidalgo, Cristina et al.
In: Plant Biotechnology Journal, Vol. 22, No. 12, 12.2024, p. 3278-3294.

Publications: Contribution to journalArticlePeer Reviewed


Network structure and fluctuation data improve inference of metabolic interaction strengths with the inverse Jacobian. / Li, Jiahang; Weckwerth, Wolfram; Waldherr, Steffen.
In: Npj systems biology and applications, Vol. 10, No. 1, 137, 12.2024.

Publications: Contribution to journalArticlePeer Reviewed


Where to after COVID-19? Systems thinking for a human-centred approach to pandemics. / Mormina, Maru; Müller, Bernhard; Caniglia, Guido et al.
In: Humanities and Social Sciences Communications, Vol. 11, No. 1, 733, 12.2024.

Publications: Contribution to journalAnnotationPeer Reviewed


CAM evolution is associated with gene family expansion in an explosive bromeliad radiation. / Groot Crego, Clara (Corresponding author); Hess, Jaqueline; Yardeni, Gil et al.
In: The Plant Cell, Vol. 36, No. 10, 03.10.2024, p. 4109-4131.

Publications: Contribution to journalArticlePeer Reviewed


Accelerating wheat improvement through trait characterization: advances and perspectives. / Roychowdhury, Rajib; Ghatak, Arindam; Kumar, Manoj et al.
In: Physiologia Plantarum, Vol. 176, No. 5, e14544, 10.2024, p. e14544.

Publications: Contribution to journalReviewPeer Reviewed


Integrative tissue-resolved proteomics and metabolomics analysis of oil palm (Elaeis guineensis Jacq.) fruit provides insights into stilbenoid biosynthesis at the interface of primary and secondary metabolism. / Hassan, Hasliza; Tahir, Noor Idayu; Rozali, Nurul Liyana et al.
In: Biocatalysis and Agricultural Biotechnology, Vol. 60, 103308, 09.2024.

Publications: Contribution to journalArticlePeer Reviewed


Visualizing Horizontal Gene Transfer Detection in Phylogenetically Divergent Bacteria. / Schwarzerova, Jana (Corresponding author); Rajasekaran, Laxmipriya; Jureckova, Katerina et al.
Bioinformatics and Biomedical Engineering - 11th International Conference, IWBBIO 2024, Proceedings. ed. / Ignacio Rojas; Francisco Ortuño; Fernando Rojas; Luis Javier Herrera; Olga Valenzuela. Springer Science and Business Media Deutschland GmbH, 2024. p. 267-277 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14849 LNBI).

Publications: Contribution to bookContribution to proceedingsPeer Reviewed


Elevated PINK1/Parkin-Dependent Mitophagy and Boosted Mitochondrial Function Mediate Protection of HepG2 Cells from Excess Palmitic Acid by Hesperetin. / Li, Wan; Cai, Zhengnan; Schindler, Florian et al.
In: Journal of Agricultural and Food Chemistry, Vol. 72, No. 23, 12.06.2024, p. 13039-13053.

Publications: Contribution to journalArticlePeer Reviewed


Stress Knowledge Map: A knowledge graph resource for systems biology analysis of plant stress responses. / Bleker, Carissa (Corresponding author); Ramšak, Živa; Bittner, Andras et al.
In: Plant Communications, Vol. 5, No. 6, 100920, 10.06.2024.

Publications: Contribution to journalArticlePeer Reviewed


High Throughput Image-Based Phenotyping for Determining Morphological and Physiological Responses to Single and Combined Stresses in Potato. / Abdelhakim, Lamis Osama Anwar; Pleskačová, Barbora; Rodriguez-Granados, Natalia Yaneth et al.
In: Journal of Visualized Experiments, No. 208, e66255, 07.06.2024.

Publications: Contribution to journalArticlePeer Reviewed


Systemic long-distance sulfur transport and its role in symbiotic root nodule protein turnover. / Siegl, Alina; Afjehi-Sadat, Leila; Wienkoop, Stefanie.
In: Journal of Plant Physiology, Vol. 297, 154260, 06.2024, p. 154260.

Publications: Contribution to journalArticlePeer Reviewed


A perspective on genetic and polygenic risk scores—advances and limitations and overview of associated tools. / Schwarzerova, Jana (Corresponding author); Hurta, Martin; Barton, Vojtech et al.
In: Briefings in bioinformatics, Vol. 25, No. 3, bbae240, 20.05.2024.

Publications: Contribution to journalArticlePeer Reviewed


Targeting PHGDH reverses the immunosuppressive phenotype of tumor-associated macrophages through α-ketoglutarate and mTORC1 signaling. / Cai, Zhengnan; Li, Wan; Hager, Sonja et al.
In: Cellular and Molecular Immunology, Vol. 21, No. 5, 05.2024, p. 448-465.

Publications: Contribution to journalArticlePeer Reviewed


Corrigendum: Sulforaphane diminishes moonlighting of pyruvate kinase M2 and interleukin 1β expression in M1 (LPS) macrophages(Front. Immunol., (2022), 13, (935692), 10.3389/fimmu.2022.935692). / Bahiraii, Sheyda; Brenner, Martin; Yan, Fangfang et al.
In: Frontiers in Immunology, Vol. 15, 1395642, 22.04.2024.

Publications: Contribution to journalCorrectionPeer Reviewed


A dynamic model of growth phase of bio-conversion of methane to polyhydroxybutyrate using dynamic flux balance analysis. / Nasershariat, Mohadeseh; Pishvaie, Mahmoud Reza; Boozarjomehry, Ramin Bozorgmehry et al.
In: Bioprocess and Biosystems Engineering, Vol. 47, No. 4, 04.2024, p. 463-474.

Publications: Contribution to journalArticlePeer Reviewed


Cell-type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm. / Zhang, Shuang; Ghatak, Arindam; Mohammad Bazargani, Mitra et al.
In: Plant Biotechnology Journal, Vol. 22, No. 3, 03.2024, p. 555-571.

Publications: Contribution to journalArticlePeer Reviewed


Integrated multi-omics analysis reveals drought stress response mechanism in chickpea (Cicer arietinum L.). / Kudapa, Himabindu; Ghatak, Arindam; Barmukh, Rutwik et al.
In: Plant Genome, Vol. 17, No. 1, e20337, 03.2024.

Publications: Contribution to journalArticlePeer Reviewed


Sulforaphane impedes mitochondrial reprogramming and histone acetylation in polarizing M1 (LPS) macrophages. / Bahiraii, Sheyda; Brenner, Martin; Weckwerth, Wolfram et al.
In: Free Radical Biology and Medicine, Vol. 213, 03.2024, p. 443-456.

Publications: Contribution to journalArticlePeer Reviewed


Calcium signaling: an emerging player in plant antiviral defense. / Zvereva, Anna S (Corresponding author); Klingenbrunner, Michael; Teige, Markus.
In: Journal of Experimental Botany, Vol. 75, No. 5, 28.02.2024, p. 1265-1273.

Publications: Contribution to journalArticlePeer Reviewed