Publications


Evidence for novel tomato seed allergens: Ige-reactive legumin and vicilin proteins identified by multidimensional protein fractionation-mass spectrometry and in silico epitope modeling. / Bässler, Olivia Y.; Weiss, Julia; Wienkoop, Stefanie et al.
In: Journal of Proteome Research, Vol. 8, No. 3, 2009, p. 1111-1122.

Publications: Contribution to journalArticlePeer Reviewed


Expression patterns within the Arabidopsis C/S1 bZIP transcription factor network: availability of heterodimerization partners controls gene expression during stress response and development. / Weltmeier, Fridtjof; Rahmani, Fatima; Ehlert, Andrea et al.
In: Plant Molecular Biology: an international journal on molecular biology, biochemistry and genetic engineering, Vol. 69, No. 1-2, 2009, p. 107-119.

Publications: Contribution to journalArticlePeer Reviewed


Functional complementation of yeast mutants to study plant signalling pathways. / Mehlmer, Norbert; Scheikl, Elisabeth; Teige, Markus (Corresponding author).
Plant Signal Transduction. Humana Press, 2009. p. 235-245 (Methods in Molecular Biology).

Publications: Contribution to bookChapter


Metabolic Engineering. / Kempa, Stefan; Walther, Dirk; Ebenhöh, Oliver et al.
Molecular Biology and Biotechnology, 5th Edition, Royal Society of Chemistry 2009. ed. / John M. Walker; Ralph Rapley. Unknown publisher, 2009.

Publications: Contribution to bookChapter


Metabolomics and Proteomics data integration: from molecule to organism. / Weckwerth, Wolfram.
Plant Systems Biology. ed. / Gloria Coruzzi; Rodrigo Gutierrez. Wiley-Blackwell, 2009.

Publications: Contribution to bookChapter


Metabolomics: Integrating the Metabolome and the Proteome for Systems Biology. / Weckwerth, Wolfram.
Plant Systems Biology. ed. / Gloria Coruzzi. New York: Wiley - V C H, 2009. p. 258-289 (Annual Plant Reviews, Vol. 35).

Publications: Contribution to bookChapter


Proteomics in Genomannotation und Systembiologie. / Wienkoop, Stefanie; Weckwerth, Wolfram.
In: BioSpektrum, Vol. 2009, No. 2, 2009, p. 148-151.

Publications: Contribution to journalArticlePeer Reviewed


VIP1 response elements mediate mitogen-activated protein kinase 3-induced stress gene expression. / Pitzschke, Andrea; Djamei, Armin; Teige, Markus et al.
In: Proceedings of the National Academy of Sciences of the United States of America (PNAS), Vol. 106, No. 43, 2009, p. 18414-18419.

Publications: Contribution to journalArticlePeer Reviewed


Absolute quantification of Medicago truncatula sucrose synthase isoforms and N-metabolism enzymes in symbiotic root nodules and the detection of novel nodule phosphoproteins by mass spectrometry. / Wienkoop, Stefanie (Corresponding author); Larrainzar, Estibaliz; Glinski, Mirko et al.
In: Journal of Experimental Botany, Vol. 59, No. 12, 2008, p. 3307-3315.

Publications: Contribution to journalArticlePeer Reviewed


A Cytosolic Pathway for the Conversion of Hydroxypyruvate to Glycerate during Photorespiration in Arabidopsis. / Wienkoop, Stefanie; Weckwerth, Wolfram; Timm, Stefan et al.
In: The Plant Cell, Vol. 20, No. 10, 2008, p. 2848-2859.

Publications: Contribution to journalArticlePeer Reviewed


A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment. / Höhenwarter, Wolfgang; van Dongen, Joost T.; Wienkoop, Stefanie et al.
In: Proteomics, Vol. 8, 2008, p. 4214-4225.

Publications: Contribution to journalArticlePeer Reviewed


Differentiation between protein O-phosphorylation and O- sulfonation by positive ion electrospray tandem mass spectrometry. / Weckwerth, Wolfram; Glinski, Mirko (Corresponding author); Wolschin, Florian.
In: Rapid Communications in Mass Spectrometry, 2008.

Publications: Contribution to journalArticlePeer Reviewed


Experimental testing of predicted myristoylation targets involved in asymmetric cell division and calcium-dependent signalling. / Teige, Markus; Knoblich, Jürgen; Eisenhaber, Frank et al.
In: Cell Cycle, Vol. 7, No. 23, 2008, p. 3709-3719.

Publications: Contribution to journalArticlePeer Reviewed


If the antibody fails -- a mass Western approach. / Lehmann, Ute; Wienkoop, Stefanie; Tschoep, Hendrik et al.
In: The Plant Journal, Vol. 55, No. 6, 2008, p. 1039-1046.

Publications: Contribution to journalArticlePeer Reviewed


Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in Arabidopsis thaliana. / Wienkoop, Stefanie; Morgenthal, Katja; Wolschin, Florian et al.
In: Molecular and Cellular Proteomics, Vol. 7, 2008, p. 1725-1736.

Publications: Contribution to journalArticlePeer Reviewed


Integration of metabolomics and proteomics in molecular plant physiology -- coping with the complexity by data-dimensionality reduction. / Weckwerth, Wolfram.
In: Physiologia Plantarum, Vol. 132, 2008, p. 176-189.

Publications: Contribution to journalArticlePeer Reviewed


Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii. / May, Patrick; Wienkoop, Stefanie; Kempa, Stefan et al.
In: Genetics: a periodical record of investigations bearing on heredity and variation, Vol. 179, 2008, p. 157-166.

Publications: Contribution to journalArticlePeer Reviewed


PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. / Heazlewood, Joshua L.; Durek, Pawel; Hummel, Jan et al.
In: Nucleic Acids Research, Vol. 36, No. suppl 1, 2008, p. 1015-1021.

Publications: Contribution to journalArticlePeer Reviewed


Phosphorylation of Sucrose-Phosphate Synthase by a native 350 KDa Akin10/11betagamma protein kinase complex. / Weckwerth, Wolfram (Corresponding author); Gadomska, Julita; Lehmann, Ute.
In: Plant Physiology, 2008.

Publications: Contribution to journalArticlePeer Reviewed


The multinational Arabidopsis steering subcommitee for proteomics assembles the largest proteome database resource for plant systems biology. / Weckwerth, Wolfram; Baginsky, Sacha; van Wijk, Klaas et al.
In: Journal of Proteome Research, Vol. 7, 2008, p. 4209-4210.

Publications: Contribution to journalArticlePeer Reviewed